Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs7646524 chr3:16047458 T/C 6.9E-5 282 20.4 26.57 25.58 KM Plot
KIRP rs76469370 chr17:80851827 C/T 2.49E-6 283 26.2 25.85 16.77 KM Plot
KIRP rs7647263 chr3:197161702 A/G 0.000172 289 24.8 26.8 19.95 KM Plot
KIRP rs7648083 chr3:16015054 A/G 1.23E-6 285 23.32 29.77 23.08 KM Plot
KIRP rs76519267 chr15:61542308 A/C 1.43E-7 283 26.37 24.67 7.47 KM Plot
KIRP rs76568631 chr7:20667427 A/G 2.29E-5 288 25.82 22.57 11.2 KM Plot
KIRP rs76624104 chr15:61541817 T/C 1.43E-7 283 26.37 24.67 7.47 KM Plot
KIRP rs76627127 chr11:93001212 T/C 1.21E-6 287 26.28 20.5 10.83 KM Plot
KIRP rs76706942 chr10:43505162 A/G 4.3E-5 289 25.67 25.95 11.43 KM Plot
KIRP rs76716952 chr11:46990462 A/T 7.54E-12 288 25.57 28.03 10.82 KM Plot
KIRP rs76734820 chr16:90024228 C/T 2.09E-8 281 24.67 34.82 5.95 KM Plot
KIRP rs7675378 chr4:37691330 G/T 0.000162 289 12.1 25.6 25.7 KM Plot
KIRP rs76845299 chr10:43115096 A/G 6.87E-5 289 25.57 27.47 11.43 KM Plot
KIRP rs76850098 chr10:124802995 G/A 0.000119 287 25.57 27.37 18.33 KM Plot
KIRP rs76859629 chr7:20671782 T/G 2.29E-5 288 25.82 22.57 11.2 KM Plot